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Python

compbio

6.047 ClassResearch Project on ADR prediction

PythonEmerging
GitHub
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1
Last push
79mo ago

Recent commits

Latest commits.

  • Converted all binding affinities to the same unit ( nanomolar ) and wrote custom command to generate graph txt files from the postgres data.
    7b04171Alexandra Dima79mo ago
  • Refactored the cluster django command
    c0917bcAlexandra Dima79mo ago
  • Added pdb ids to all Target entries in the db and initial implementation of protein pocket clustering
    add099cAlexandra Dima79mo ago
  • Created the final knowledge graph postgres database with django and wrote scripts to populate the db
    c1953d5Alexandra Dima79mo ago
  • Extracted protein pocket sequences and bidning affinites from PDBBind refined set
    f29e504
Alexandra Dima
80mo ago
  • Added script to augment knowledge graph edges with substructure information.
    291d357Alexandra Dima80mo ago
  • Initial commit
    29105fdAlexandra Dima80mo ago
  • Top contributors

    Builders behind this project.

    adadima
    7 commits