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public_health_bioinformatics

Bioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of pathogens of public health concern.

OtherEmerging
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8
Last push
2mo ago

Recent commits

Latest commits.

  • [Read Screen] fail gracefully if files are empty (#1036)
    687f163Sage Wright2mo ago
  • [TheiaCoV] bump version of genoflu to 1.07 (#1035)
    b520dd1Sage Wright2mo ago
  • [CZGenEpi_Prep] Deprecate CZGenEpi_Prep (#1032)
    77e7ee4Sage Wright3mo ago
  • [IRMA] IRMA Task Refactor (#974)
    dcc90c9Andrew Hale3mo ago
  • [Documentation] Pin version of mkdocs-material and used plugins (#1029)
    db559c7Sage Wright3mo ago
  • [PHB] Initialize automated testing (#999)
    9fb51deZachary Konkel3mo ago
  • [Metabuli | Fastp] Init Metabuli standalone workflow (#1006)
    6a0f127Zachary Konkel3mo ago
  • [Bracken] Add Bracken to kraken2 tasks (#1005)
    2e087a5Zachary Konkel3mo ago
  • Top contributors

    Builders behind this project.

    sage-wright
    474 commits
    kapsakcj
    149 commits
    cimendes
    100 commits
    kevinlibuit
    68 commits
    jrotieno
    64 commits
    awh082834
    51 commits
    michellescribner
    51 commits
    xonq
    47 commits