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samtools

Samtools with CRAM support (inherited from staden package io_lib).

CEmerging

Stars

4

Forks

—

Contributors

8

Last push

2mo ago

Recent commits

Latest commits.

Revise collate to require an input filename.
27127dcJames Bonfield45mo ago
Fix SEGV in samtoools collate when no filename given.
cc20bbeJames Bonfield45mo ago
Allow ampliconstats bed file to use fewer refs than the input file
0863cb4Rob Davies45mo ago
Also change the new pileup function quality scoring for gaps.
c29d312James Bonfield45mo ago
Work around PacBio HiFi quality induced biases.
fba9355James Bonfield46mo ago

Make calmd run faster on non-position-sorted data

06bb098Rob Davies46mo ago

Stop reads wrongly being removed in hard clip mode. (PR #1722)

15f42a9Andrew Whitwham45mo ago

Use POSIX `grep`

64cbfb6David Seifert45mo ago

Top contributors

Builders behind this project.