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endo

sadkingbilly/endo

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Last push

66mo ago

Recent commits

Latest commits.

Add dna_chain.{h,c} and tests.
f900217Jurij Smakov66mo ago
Optimization: avoid copying input sequence on every matchreplace() iteration.
c876654Jurij Smakov66mo ago
Add ability to limit number of iterations and profiling support.
54e4e37Jurij Smakov66mo ago
Fix whitespace issue in replace.c. Check in the reference output RNA file.
e5d6197Jurij Smakov66mo ago
Do not use asnat cache by default. The speedup is marginal, while it consumes significantly more memory.
4c16427Jurij Smakov66mo ago

Switch back to using old protect(), turns out to be faster. Remove early termination after 10000 iterations.

451be4dJurij Smakov66mo ago

Add more targets for easy experimentation.

bd9c334Jurij Smakov66mo ago

Fix memory leak, the DNA sequence created for PITEM_DNA_SEQ was not freed. Add test covering this case.

1abf467Jurij Smakov66mo ago

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