Refactor citation format in CITATION file; update documentation for cpDecomposition, cpmNormalization, dRegulation, makeNetworks, manifoldAlignment, pcNet, scQC, and tensorDecomposition functions to improve clarity and consistency. Add C++ backend for pcNet computation with Rcpp integration, including tests for performance validation. Introduce Makevars for package compilation and ensure compatibility across platforms. Update test cases for scQC to reflect changes in expected outputs.
d7505cfDaniel Osorio3mo ago