LoreonLabsPlatform

Overview

Intelligence

Markets
Builders
Research
Ecosystems
Launchpads

Search

C

pysam

Pysam is a python module for reading and manipulating Samfiles. It's a lightweight wrapper of the samtools C-API. Pysam also includes an interface for tabix.

CEmerging

Stars

—

Forks

—

Contributors

8

Last push

115mo ago

Recent commits

Latest commits.

{AH} update tests. de-nove AlignedSegment still not writeable as SAM
4f476b4Andreas Heger115mo ago
{AH} set fields in AlignedSegment() objects created from python so that produce valid SAM/BAM output, closes #312
39c2acaAndreas Heger115mo ago
Additional release notes
813d7f7Kevin Jacobs115mo ago
{AH} add release notes
162d14eAndreas Heger115mo ago
Support Python 3.6 file system path protocol (#392)
7eed3a5Kevin Jacobs115mo ago

{AH} make make output silent, fixes #349

01d85daAndreas Heger115mo ago

{AH} treat special case -c option in samtools view outputs to stdout even if -o given, fixes #315

135f843Andreas Heger115mo ago

Merge pull request #391 from pysam-developers/AH-UseCondaPackagesForExternals

11bb611Andreas Heger115mo ago

Top contributors

Builders behind this project.